PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AA65G00368 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
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Family | bZIP | ||||||||
Protein Properties | Length: 190aa MW: 22795.9 Da PI: 6.3411 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.6 | 7.5e-15 | 82 | 132 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +++rr+++NRe+ArrsR RK+ ++eL v L + N++L+++l++l++ AA65G00368 82 RKQRRMISNRESARRSRMRKQRHLDELWSQVIRLRTDNHSLIDKLNHLSES 132 79**********************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-14 | 78 | 142 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.645 | 80 | 132 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.0E-12 | 82 | 134 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.88E-13 | 82 | 132 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.1E-13 | 82 | 132 | No hit | No description |
CDD | cd14702 | 9.16E-19 | 83 | 134 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 85 | 100 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence Send to blast |
MNTIPANFTG NFHYLSPENH YKTPILEATE EYILNNYNYS SSSNGQDLIT SNTSSTSDED 60 HHHYYHDHHD HHHDNKMIID ERKQRRMISN RESARRSRMR KQRHLDELWS QVIRLRTDNH 120 SLIDKLNHLS ESHQLALKEN IKLKEETSDL KQLITFLKSN NNNNIEINDY YYSKYDEDNT 180 EFIKDFEDSI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 101 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AA65G00368 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002892761.1 | 1e-64 | basic leucine zipper 43 | ||||
Swissprot | Q9FMC2 | 8e-31 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | D7KQH3 | 2e-63 | D7KQH3_ARALL; BZIP transcription factor family protein | ||||
STRING | scaffold_101520.1 | 4e-64 | (Arabidopsis lyrata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2892 | 24 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13600.1 | 9e-61 | basic leucine-zipper 58 |
Publications ? help Back to Top | |||
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