PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678459617
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 262aa    MW: 28669.1 Da    PI: 7.5555
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678459617genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-10130177455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L+ l+P +    +k + Ka +L + ++YI+sLq
  678459617 130 SHSLAERARREKISERMKILQNLVPGC----NKVVGKALVLDEIINYIQSLQ 177
                8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.27E-11124181No hitNo description
SuperFamilySSF474599.42E-18124193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-18126193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.739126176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-8130177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.6E-11132182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MDLRRVIMVS DGGGGVREYG YPEMWPGLQM NSNVVSYVKN ADQMSVGEDE RSGKEGASTS  60
NSIGGNNSSS TLVNQGDSIR RKEMEFNENG ECKAEAGGNS GQKVGKASKP AEPPRDYIHV  120
RARRGQATDS HSLAERARRE KISERMKILQ NLVPGCNKVV GKALVLDEII NYIQSLQRQV  180
EFLSMKLEAV NSRLGIEQCH SKEVTGPASQ QTQVFTLQFP HQPFVAPSIT FPPPNTGDYG  240
RSSAPSPEWL HMQLGGGFDP MS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678459617
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071046.11e-77transcription factor bHLH79-like
SwissprotQ69WS37e-59BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A2G9G2R32e-77A0A2G9G2R3_9LAMI; Uncharacterized protein
STRINGMigut.L01368.1.p6e-74(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.18e-63BIG PETAL P