PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678430275
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 357aa    MW: 39841.5 Da    PI: 9.7267
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678430275genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.1e-1378129155
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +r++h ++Er+RR+++N+ ++ Lr+l+P++   +  + + a+i+  A++++k+L+
  678430275  78 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVHRGDQASIVGGAIDFVKELE 129
                79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.7E-1375132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.46E-1375133No hitNo description
SuperFamilySSF474593.66E-1676142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.96477128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-1078129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.9E-1083134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MFTFMALEAL STSELLNYII YDAAVAPEIV LPDVNATQTP PPPPPPPPPP PSGSVVAPRK  60
KRRRRPRICR NKEEEETQRM THIAVERNRR KQMNEHLAVL RSLMPESYVH RGDQASIVGG  120
AIDFVKELEH VLQTLQAKKA SAAANASGGE ENPFSHFFLY PQISQLGHKY VSQTKTPVAD  180
IEVVLIETHA HIRILCRHRR RRGSHLSQLV ISFHAAALSI LHLNVTTLEP LLLYSISAKV  240
EEGCQFASAD DIAGAVHHML LILQDEDAAV VNRKFSQKPN PLVRSQEGIR AVCGSPHAIS  300
PPPSALSAAR IRFRASESTP NFRKNPNREE QKELRRHESV SGFSDGRFER VSKEYQG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15765PRKKRRRRP
25864RKKRRRR
35964KKRRRR
47889RMTHIAVERNRR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678430275
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022731905.11e-97transcription factor bHLH71-like isoform X2
RefseqXP_022732027.11e-97transcription factor bHLH71-like isoform X1
SwissprotQ56XR06e-66BH071_ARATH; Transcription factor bHLH71
TrEMBLA0A4D9AKB21e-101A0A4D9AKB2_SALSN; Uncharacterized protein
STRINGMigut.O00536.1.p1e-93(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA56322436
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.12e-55bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]