PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678426954
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 451aa    MW: 50786.4 Da    PI: 7.4587
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678426954genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.00029388410123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ++Cp C+++F++   L  H r+H
  678426954 388 HVCPFCNRVFKNGQALGGHKRSH 410
                79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.76E-71032No hitNo description
PROSITE profilePS501578.61032IPR007087Zinc finger, C2H2
PfamPF139125.1E-51032IPR007087Zinc finger, C2H2
SMARTSM003550.821032IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002801232IPR007087Zinc finger, C2H2
SuperFamilySSF576671.76E-790117No hitNo description
SMARTSM003550.2195117IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.68195122IPR007087Zinc finger, C2H2
PfamPF139124.6E-796119IPR007087Zinc finger, C2H2
PROSITE patternPS00028097117IPR007087Zinc finger, C2H2
SuperFamilySSF576676.97E-5323345No hitNo description
PfamPF139124.2E-8323346IPR007087Zinc finger, C2H2
SuperFamilySSF576676.97E-5383410No hitNo description
PfamPF139123.7E-8388410IPR007087Zinc finger, C2H2
PROSITE profilePS501579.245388410IPR007087Zinc finger, C2H2
SMARTSM003550.014388410IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280390410IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MEDENLELKF VCKLCDKRYP CGKSLGGHVR SHNVVLNSPP CDEKAESNFK KFGSLLMNEP  60
KFEESENGQS SYILRENPRK TWRAVGSSFT MQQERVCKQC GKGFQSLKAL CGHMACHSDR  120
DKGIKGDQSW SSDSRKLEID SHSDTEEHSD RIIRTRSFKS NKKADTKCCS FSLANNGYSS  180
SVSEIDGDEQ EEVAMCLMML SRDSTIFHIG LNSVGESSDN SSVILEKKSS SIDMKTRKME  240
PPKPVNHMDS KLKQWESETA QSDDSDSGYF LDECNRVDSE LSVNGRHKSS AFAEYNKSLM  300
NEHDAEYRHS VAGTKGSQKR SKYECFSCKK VFESYQALGG HKPCYKRSNE YCESSENSPR  360
DSTELINDRK PSGKALDEKN NAKKNKGHVC PFCNRVFKNG QALGGHKRSH FIGRHRSNRD  420
RIQGAKPDLL DLNLPAPEEA EEDVDANVSG W
Cis-element ? help Back to Top
SourceLink
PlantRegMap678426954
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022852135.11e-142uncharacterized protein LOC111373804
TrEMBLA0A2G9HWQ11e-166A0A2G9HWQ1_9LAMI; Uncharacterized protein
STRINGMigut.L01205.1.p1e-125(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13432255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.11e-65C2H2-like zinc finger protein