PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678426486
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 293aa    MW: 32082.5 Da    PI: 8.2987
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678426486genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.91.8e-05265287223
                EETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                +Cp+C+k F+++  L+ H  + H
  678426486 265 VCPKCSKGFRDPVALVEHVERdH 287
                7*****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183107.06E-12752No hitNo description
PROSITE profilePS510397.8371059IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.101.9E-101153IPR000058Zinc finger, AN1-type
SMARTSM001540.00881352IPR000058Zinc finger, AN1-type
PfamPF014286.4E-131351IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.108.3E-1292157IPR000058Zinc finger, AN1-type
SuperFamilySSF1183101.12E-993150No hitNo description
PROSITE profilePS510398.02898145IPR000058Zinc finger, AN1-type
SMARTSM001540.066101142IPR000058Zinc finger, AN1-type
PfamPF014281.9E-8101141IPR000058Zinc finger, AN1-type
SMARTSM003550.066230253IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280232253IPR007087Zinc finger, C2H2
PROSITE profilePS501578.829264292IPR007087Zinc finger, C2H2
SMARTSM003555.4264287IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280266287IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MGTPAFPNLG KHCGLEECRQ IDFLPFTCDC CQQVFCLDHR SYTSHQCPKA NKADVTVVVC  60
PLCARGVRLV PDQDPNIIWE SHVNVECDPS NYAIAMNKKK CPVPRCKETL TFSNKIKCRD  120
CNIEHCLKHR FGADHNCPGP KKPESVFQFM SSMNRDRNQD PKRAAPTSSS SSNWTSAFSR  180
VASSLYAKAE AGISKLGNDF NQAVSTSGAA DRTTAVGNPG PKAGTSSQVE ICPQCKLRFS  240
NIGALVEHVE KVHERNGVMK VTLDVCPKCS KGFRDPVALV EHVERDHGGA SKA
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00306DAPTransfer from AT2G41835Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678426486
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075237.11e-154zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
SwissprotQ8VZ421e-117SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLA0A2G9GNB81e-156A0A2G9GNB8_9LAMI; Putative Zn-finger protein
STRINGMigut.J01765.1.p1e-148(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53112237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-118C2H2 family protein