PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678406563
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family GeBP
Protein Properties Length: 370aa    MW: 41013.6 Da    PI: 6.0548
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678406563genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573106.42.1e-33149245298
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                +fqr+ws++DeivlL G++d+ ++++++p+ +i+ f++ ++++++++v+k+ql +K+r LK++f+++++k  +g++ +fsk+h++ +++lskkiWg+
  678406563 149 NFQRIWSDDDEIVLLSGMLDYMEEKKADPYVEITSFHDSIRERLQVTVNKDQLRSKMRALKRRFTNNQSKEVDGEDRVFSKPHEHLAYQLSKKIWGK 245
                79*********************************************************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.1E-29150244IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MAKNRDPAPQ HECTSEEEES GSESESESES EREPTPPPTK GRSKPATTQT PQPQKPHEKS  60
EDSDSGSGSE SDESSDDEAP SQPEPVVQKP ASVKKPTTTQ TSSSKVTTPA TKVAGVKRAA  120
ETNGQSVKDA KKGKTKNDTL AETGSKRSNF QRIWSDDDEI VLLSGMLDYM EEKKADPYVE  180
ITSFHDSIRE RLQVTVNKDQ LRSKMRALKR RFTNNQSKEV DGEDRVFSKP HEHLAYQLSK  240
KIWGKASMET SVGSLCPKLP QQPIIRKEKS VSEHSNGVIP VEVADAVKTG ADGDTLRKFS  300
NLRSNSGGAR DMEEMILKIG RELFEGGKVV EGSKVWKNLE LQQMEIYLET LQIKTEQTRL  360
VLDGLKSQNL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1205210RALKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678406563
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.13e-22DNA-binding storekeeper protein-related transcriptional regulator