PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678339316 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | bZIP | ||||||||
Protein Properties | Length: 495aa MW: 54683.9 Da PI: 6.6758 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.6 | 3.1e-09 | 183 | 226 | 2 | 45 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 ++ k+ rr+++NReAAr+sR RKka++++Le+ +L + ++L 678339316 183 RDQKALRRLAQNREAARKSRMRKKAYVQQLENSRLKLAQLEQEL 226 78899**************************9655555444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-6 | 182 | 247 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.4E-4 | 184 | 227 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.438 | 184 | 228 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.32E-6 | 186 | 227 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-6 | 186 | 228 | No hit | No description |
CDD | cd14708 | 4.05E-21 | 186 | 237 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 189 | 204 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.4E-28 | 271 | 343 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 495 aa Download sequence Send to blast |
MHSFKAAAAT QAMVLNNSDV YCQHQSTFYQ RDEDSRNGTR FADLGELEQS TENGFHNDDA 60 GLSRSAMYTA MKTTNVSAIS SGLQFGGHNN SLASAEMFPP GATAVDSSRF AVPKGPLAGI 120 GAGNGYLVSG PFENWADSGM LADNSQQTDT STDTDDKNQY LGGENHERLH ADDSTNEANR 180 KDRDQKALRR LAQNREAARK SRMRKKAYVQ QLENSRLKLA QLEQELKRAR QPGPFLSNGG 240 VADQCNSAGG NGSSSFDLSY TRWLDEHQRL IGDLRSAVNC QAGESDLRLL VEGVMSHYDE 300 VFRLKSIGAK SDVFHMLSGM WKTPTERCFM WLGGFRCSEM LKVTQHHYSA HFLPPNVHLT 360 DNTRQIIGNP IEPLTEQQLV GMCNLQQSSQ QAEDALSQGL EALQQSLVET LSSNGPGLCT 420 SGNVADYMGQ MSIAMSKLAT LENFLHQADL LRQQTLQQLQ RILTTHQAAR ALLAISDYRA 480 RLRALSSLWL ARPRE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678339316 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011077152.1 | 0.0 | transcription factor HBP-1b(c38)-like | ||||
Swissprot | Q41558 | 1e-149 | HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment) | ||||
TrEMBL | A0A4D9A4X8 | 0.0 | A0A4D9A4X8_SALSN; Transcription factor TGA | ||||
STRING | EOY02112 | 0.0 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA820 | 23 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 1e-129 | bZIP family protein |