PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678295096 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | WRKY | ||||||||
Protein Properties | Length: 128aa MW: 14230.8 Da PI: 9.5528 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.2 | 5e-11 | 98 | 119 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK+vk++ +pr 678295096 98 LDDGYKWRKYGQKSVKNTSHPR 119 59*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.4E-12 | 86 | 120 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.62E-9 | 91 | 120 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 13.31 | 93 | 128 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.6E-4 | 98 | 128 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.4E-7 | 99 | 120 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence Send to blast |
MEPQFTHVSD AFDTSLSVSE ASPDVLGRTS LEQPLSRTDP RGPLSSIPSI DRIPVDSPVP 60 GDAEMVGETT ERTGKKKKMH TPGIARVAFH TTSAEDVLDD GYKWRKYGQK SVKNTSHPRY 120 QRRSFRST |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678295096 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022881294.1 | 2e-17 | probable WRKY transcription factor 43 | ||||
TrEMBL | A0A2Z7A1R9 | 5e-15 | A0A2Z7A1R9_9LAMI; Putative WRKY transcription factor 56-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6374 | 24 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64000.1 | 5e-17 | WRKY DNA-binding protein 56 |