PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462961708

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

bZIP

Protein Properties

Length: 190aa MW: 21048.5 Da PI: 10.711

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462961708	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.5	9.1e-16	110	164	5	58
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk.keleelkkevak 58 +r+rr++kNRe+A rsR+RK+a+i eLe +v++L++ N++L+ k++e+lkk+ ++ 462961708 110 RRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKEHNEELQkKQAEMLKKQKDE 164 79***************************************61568888887655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.3E-13	106	171	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.139	108	160	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.4E-15	110	161	No hit	No description
SuperFamily	SSF57959	4.25E-11	110	159	No hit	No description
CDD	cd14707	3.64E-26	110	164	No hit	No description
Pfam	PF00170	1.7E-13	110	164	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	113	128	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence Send to blast
MTLEDFLVRA GVVRENLGQS LVLPQQGQGM FQQTNVVTPT MQLGNGMVPG IVGQAVNGGM 60 TVAAPTTPVV LNGFGKVEAG DLSSLSPVPY PFDSALRVRK GPTVEKVVER RQRRMIKNRE 120 SAARSRARKQ AYIMELEAEV AKLKEHNEEL QKKQAEMLKK QKDEVLERIS KQQGPKAKKL 180 CLQRTLTGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in abscisic acid (ABA) signaling pathway (PubMed:20576316, PubMed:19947981, PubMed:21546455, PubMed:22301130, PubMed:26300907, PubMed:27468891). Transcription factor activity is fully activated by ABA (PubMed:19947981, PubMed:26300907, PubMed:27468891). Acts as positive regulator of the expression of abiotic stress-responsive genes through an ABA-dependent signaling pathway (PubMed:20576316). Acts as positive regulator of ABA signaling and drought stress tolerance (PubMed:22301130). Plays an important role in ABA and auxin responses. Involved in ABA signaling and stress responses by directly binding to the ABA-responsive element (ABRE)-containing genes, especially WRKY family genes. Modulates response to auxin. Suppresses auxin signaling by targeting ABRE-containing genes related to auxin metabolism or signaling (PubMed:21546455). {ECO:0000269\|PubMed:19947981, ECO:0000269\|PubMed:20576316, ECO:0000269\|PubMed:21546455, ECO:0000269\|PubMed:22301130, ECO:0000269\|PubMed:26300907, ECO:0000269\|PubMed:27468891}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00038	PBM	Transfer from AT4G34000	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462961708

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:20576316, PubMed:18315698, PubMed:21546455, PubMed:22301130). Induced by auxin (PubMed:21546455, PubMed:22301130). Induced by gibberellin (PubMed:21546455). Induced by salt and drought stresses (PubMed:20576316, PubMed:21546455, PubMed:22301130). Induced by cold stress (PubMed:20576316). Induced by oxidative stress (PubMed:20576316, PubMed:22301130). {ECO:0000269\|PubMed:18315698, ECO:0000269\|PubMed:20576316, ECO:0000269\|PubMed:21546455, ECO:0000269\|PubMed:22301130}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004964902.1	1e-108	bZIP transcription factor 46
Swissprot	Q69TW5	3e-91	BZP46_ORYSJ; bZIP transcription factor 46
TrEMBL	K3XY81	1e-106	K3XY81_SETIT; Uncharacterized protein
STRING	Pavir.Da01931.1.p	1e-108	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	8e-45	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Hossain MA, et al. The ABRE-binding bZIP transcription factor OsABF2 is a positive regulator of abiotic stress and ABA signaling in rice. J. Plant Physiol., 2010. 167(17): p. 1512-20 [PMID:20576316] Yang X, et al. Rice ABI5-Like1 regulates abscisic acid and auxin responses by affecting the expression of ABRE-containing genes. Plant Physiol., 2011. 156(3): p. 1397-409 [PMID:21546455] Li YS, et al. A novel nuclear protein phosphatase 2C negatively regulated by ABL1 is involved in abiotic stress and panicle development in rice. Mol. Biotechnol., 2013. 54(2): p. 703-10 [PMID:23086454] Guo C,Ge X,Ma H The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant Mol. Biol., 2013. 82(3): p. 239-53 [PMID:23686450] Huang X, et al. OsSLI1, a homeodomain containing transcription activator, involves abscisic acid related stress response in rice (Oryza sativa L.). ScientificWorldJournal, 2014. 2014: p. 809353 [PMID:25089296] Kim N, et al. Functional characterization and reconstitution of ABA signaling components using transient gene expression in rice protoplasts. Front Plant Sci, 2015. 6: p. 614 [PMID:26300907] Chen H, et al. Characterization of OsPM19L1 encoding an AWPM-19-like family protein that is dramatically induced by osmotic stress in rice. Genet. Mol. Res., 2015. 14(4): p. 11994-2005 [PMID:26505346] Tang N, et al. MODD Mediates Deactivation and Degradation of OsbZIP46 to Negatively Regulate ABA Signaling and Drought Resistance in Rice. Plant Cell, 2016. 28(9): p. 2161-2177 [PMID:27468891]