PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM4187
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Subtree rooted at node 96: /---------- XP_013634885.1 [Brassica oleracea] (2) | | /----- XP_009140847.1 [Brassica rapa] (7) /-100+-99-+ | | \----- GSBRNA2T00045220001 [Brassica napus] (43) | | /-100-+ \---------- GSBRNA2T00127778001 [Brassica napus] (19) | | | | /----- RrC7292_p1 [Raphanus raphanistrum] (3) /-------------------59-------------------+ \---100---+ | | \----- Rsa1.0_04515.1_g00002.1 [Raphanus sativus] (40) | | | \--------------------- Tp4g10970 [Thellungiella parvula] (55) | | /----- Carubv10023654m [Capsella rubella] (4) | /---100---+ | | \----- Cagra.12562s0002.1.p [Capsella grandiflora] (48) | | | /-100-+ /----- Csa16g017030.1 [Camelina sativa] (10) | | | /-95-+ | | | | \----- Csa07g016490.1 [Camelina sativa] (38) | /-100+ \-100+ | | | \---------- Csa05g038570.1 [Camelina sativa] (20) | | | | | \--------------------- Bostr.27991s0112.1.p [Boechera stricta] (31) | | | /------------99-----------+ /----- Araha.18448s0005.1.p [Arabidopsis halleri] (35) | | |---------100--------+ | | | \----- 481693 [Arabidopsis lyrata] (56) | | | | | \-------------------------- AT2G28160.1 [Arabidopsis thaliana] (53) | | | | /----- XP_010557357.1 [Tarenaya hassleriana] (6) | | /--------------100-------------+ | | | \----- XP_010521720.1 [Tarenaya hassleriana] (9) | | | | | | /----- orange1.1g042465m [Citrus sinensis] (11) | | | /---100---+ | | | | \----- Ciclev10029810m [Citrus clementina] (25) | | | | | | | | /----- Neem_7586_f_1 [Azadirachta indica] (13) | | | |---100---+ | | | /--91-+ \----- Neem_24832_f_1 [Azadirachta indica] (21) | | | | | | | | | | /----- Ciclev10029784m [Citrus clementina] (37) | | | | | /-100+ | | | | | | \----- orange1.1g042663m [Citrus sinensis] (42) | | | | \-100+ | | | /-100+ \---------- Neem_6969_f_1 [Azadirachta indica] (52) --69-+ | | | | | | | | | /----- orange1.1g021355m [Citrus sinensis] (12) | /-95-+ /-100+ | | /-100+ | | | | | | | | \----- Ciclev10030052m [Citrus clementina] (45) | | | | | | \----66----+ | | | | | | | /----- Neem_26692_f_1 [Azadirachta indica] (28) | | | | | | \-100+ | | | | | | \----- Neem_2601_f_2 [Azadirachta indica] (50) | | | | | | | | | | | | /----- Gh_A09G2474 [Gossypium hirsutum] (14) | | | | | /-95-+ /-99-+ | | | | | | | | \----- Cotton_A_32486_BGI-A2_v1.0 [Gossypium arboreum] (39) | | | | | | | /-100+ | | | | | | | | | /----- Gh_D09G0859 [Gossypium hirsutum] (23) | | | | | | | | \-100+ | | | | | | | /--88-+ \----- Gorai.006G105000.1 [Gossypium raimondii] (32) | | | | | | | | | | | | | | | | | \--------------- evm.TU.contig_28125.2 [Carica papaya] (24) | | | /-100+ | | | | | | | | | | | | | /----- Gh_D05G0858 [Gossypium hirsutum] (16) |-53-+ | | | \-100+ \-93-+ /-100+ | | | | | | | | \----- Gorai.009G090400.1 [Gossypium raimondii] (47) | | | | | | | /-100+ | | | | | | | | | /----- Gh_A05G0723 [Gossypium hirsutum] (27) | | | | | | | | \-96-+ | | | | | | \-100-+ \----- Cotton_A_36794_BGI-A2_v1.0 [Gossypium arboreum] (29) | | | | | | | | | \--67-+ | | \--------------- Thecc1EG041590t1 [Theobroma cacao] (49) | | | | | | | | | | /----- EcC048785.10 [Eucalyptus camaldulensis] (26) | | | | \-----------100-----------+ | | | | \----- Eucgr.B03931.1.p [Eucalyptus grandis] (33) | | | | | | | \----------------------------------------- AA32G00885 [Aethionema arabicum] (30) | | | | | \---------------------------------------------- KFK32340.1 [Arabis alpina] (17) | | | \--------------------------------------------------------- Thhalv10016957m [Eutrema salsugineum] (41) | \-------------------------------------------------------------- 676770326 [Sisymbrium irio] (54) Root part of tree: /------------------------------------------------------------------- RrC10775_p1 [Raphanus raphanistrum] (1) | |------------------------------------------------------------------- Rsa1.0_02784.1_g00001.1 [Raphanus sativus] (22) | | /--------------------------------------------- (96) | | | | /----------- GSBRNA2T00138840001 [Brassica napus] (5) | | /----100---+ + | | \----------- XP_009133880.1 [Brassica rapa] (36) | /----100---+ | | | | /----100---+---------------------- XP_013622671.1 [Brassica oleracea] (15) | | | | | | | | | \---------------------- GSBRNA2T00047327001 [Brassica napus] (44) | | \----100----+ | | | /----------- Rsa1.0_00109.1_g00007.1 [Raphanus sativus] (18) \----100---+ \---------100---------+ | \----------- RrC23113_p1 [Raphanus raphanistrum] (51) | | /--------------------------------- GSBRNA2T00118718001 [Brassica napus] (8) | | | | /----------- GSBRNA2T00148180001 [Brassica napus] (34) \----------100---------+ /----100---+ | | \----------- XP_013634470.1 [Brassica oleracea] (46) \----99----+ \---------------------- XP_009103653.1 [Brassica rapa] (57) |