PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Spipo0G0049700 | MYB family protein | |
Spipo0G0050400 | MYB family protein | |
Spipo0G0100000 | MYB family protein | |
Spipo0G0131000 | MYB family protein | |
Spipo0G0157900 | MYB family protein | |
Spipo0G0160400 | MYB family protein | |
Spipo0G0167800 | MYB family protein | |
Spipo0G0168500 | MYB family protein | |
Spipo0G0184600 | MYB family protein | |
Spipo10G0009900 | MYB family protein | |
Spipo11G0010200 | MYB family protein | |
Spipo11G0025700 | MYB family protein | |
Spipo11G0064600 | MYB family protein | |
Spipo12G0003900 | MYB family protein | |
Spipo14G0039900 | MYB family protein | |
Spipo15G0027100 | MYB family protein | |
Spipo15G0027200 | MYB family protein | |
Spipo15G0042200 | MYB family protein | |
Spipo15G0045700 | MYB family protein | |
Spipo16G0053100 | MYB family protein | |
Spipo17G0003000 | MYB family protein | |
Spipo17G0003500 | MYB family protein | |
Spipo17G0003700 | MYB family protein | |
Spipo17G0004100 | MYB family protein | |
Spipo17G0004400 | MYB family protein | |
Spipo17G0004500 | MYB family protein | |
Spipo17G0042900 | MYB family protein | |
Spipo18G0035000 | MYB family protein | |
Spipo19G0014300 | MYB family protein | |
Spipo19G0027900 | MYB family protein | |
Spipo1G0000900 | MYB family protein | |
Spipo1G0027200 | MYB family protein | |
Spipo1G0034100 | MYB family protein | |
Spipo1G0034400 | MYB family protein | |
Spipo1G0035900 | MYB family protein | |
Spipo1G0043100 | MYB family protein | |
Spipo1G0067400 | MYB family protein | |
Spipo1G0117000 | MYB family protein | |
Spipo20G0035000 | MYB family protein | |
Spipo21G0031800 | MYB family protein | |
Spipo22G0020200 | MYB family protein | |
Spipo22G0043700 | MYB family protein | |
Spipo23G0003800 | MYB family protein | |
Spipo23G0005800 | MYB family protein | |
Spipo23G0017100 | MYB family protein | |
Spipo23G0034500 | MYB family protein | |
Spipo23G0037800 | MYB family protein | |
Spipo25G0008400 | MYB family protein | |
Spipo27G0006600 | MYB family protein | |
Spipo29G0021100 | MYB family protein | |
Spipo29G0024800 | MYB family protein | |
Spipo2G0024600 | MYB family protein | |
Spipo2G0036500 | MYB family protein | |
Spipo2G0036700 | MYB family protein | |
Spipo2G0061700 | MYB family protein | |
Spipo2G0065100 | MYB family protein | |
Spipo2G0110500 | MYB family protein | |
Spipo32G0001300 | MYB family protein | |
Spipo3G0015700 | MYB family protein | |
Spipo3G0019600 | MYB family protein | |
Spipo3G0026800 | MYB family protein | |
Spipo3G0080600 | MYB family protein | |
Spipo4G0023400 | MYB family protein | |
Spipo4G0026000 | MYB family protein | |
Spipo4G0066500 | MYB family protein | |
Spipo4G0087200 | MYB family protein | |
Spipo4G0094900 | MYB family protein | |
Spipo4G0102200 | MYB family protein | |
Spipo5G0005200 | MYB family protein | |
Spipo5G0007600 | MYB family protein | |
Spipo5G0027100 | MYB family protein | |
Spipo5G0065300 | MYB family protein | |
Spipo5G0075100 | MYB family protein | |
Spipo6G0064700 | MYB family protein | |
Spipo6G0064900 | MYB family protein | |
Spipo6G0066300 | MYB family protein | |
Spipo6G0070000 | MYB family protein | |
Spipo6G0071600 | MYB family protein | |
Spipo7G0012500 | MYB family protein | |
Spipo7G0024200 | MYB family protein | |
Spipo8G0061400 | MYB family protein |
MYB factors represent a family of proteins that include the conserved MYB DNA-binding domain.The first MYB gene identified was the "oncogene" v-Myb derived from the avian myeloblastosis virus . Evidence obtained from sequence comparisons indicates that v-Myb may have originated from a vertebrate gene, which mutated once it became part of the virus. Many vertebrates contain three genes related to v-Myb c-Myb, A-Myb and B-Myb and other similar genes have been identified in insects, plants, fungi and slime moulds. The encoded proteins are crucial to the control of proliferation and differentiation in a number of cell types, and share the conserved MYB DNA-binding domain. This domain generally comprises up to three imperfect repeats, each forming a helix-turn-helix structure of about 53 amino acids. Three regularly spaced tryptophan residues, which form a tryptophan cluster in the three-dimensional helix-turn-helix structure, are characteristic of a MYB repeat. The three repeats in c-Myb are referred to as R1, R2 and R3; and repeats from other MYB proteins are categorised according to their similarity to either R1, R2 or R3.
In contrast to animals, plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. MYB proteins can be classified into three subfamilies depending on the number of adjacent repeats in the MYB domain (one, two or three). We refer to MYB-like proteins with one repeat as "MYB1R factors", with two as "R2R3-type MYB" factors, and with three repeats as "MYB3R" factors.
Stracke R, Werber M, Weisshaar B.
The R2R3-MYB gene family in Arabidopsis thaliana.
Curr Opin Plant Biol. 2001 Oct;4(5):447-56. Review.
PMID: 11597504