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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH06532.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | AP2 | ||||||||
Protein Properties | Length: 126aa MW: 13383.7 Da PI: 9.6307 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43 | 1.2e-13 | 37 | 86 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+w++k++rW A I k+++lg+f + +Aa+a ++a+ kl+g PNH06532.1 37 SKFRGVCWNRKNKRWQAAINTG-----GKYVYLGSFTAEHDAARAFDNAAIKLRG 86 79****************8883.....4**********99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MRSRATAPDD EYEVGTSGGD DEGGGTQRNG EQRALSSKFR GVCWNRKNKR WQAAINTGGK 60 YVYLGSFTAE HDAARAFDNA AIKLRGSKGT AGAEARGGFR AAHQLQLPEL VQQLQEAAAG 120 MQPGGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G39250.1 | 1e-09 | AP2 family protein |