PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH04216.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | NF-YB | ||||||||
Protein Properties | Length: 201aa MW: 21197.3 Da PI: 7.5089 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 177 | 1.8e-55 | 16 | 110 | 2 | 96 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 reqdrflPian+srimkk+lP+naki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa++tlGfe+y+eplkvyl+k+re+ ++ PNH04216.1 16 REQDRFLPIANISRIMKKALPGNAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMTTLGFEEYLEPLKVYLAKFREAATA 110 89*****************************************************************************************8765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MSADEGDARD GVSNAREQDR FLPIANISRI MKKALPGNAK IAKDAKETVQ ECVSEFISFI 60 TSEASDKCQR EKRKTINGDD LLWAMTTLGF EEYLEPLKVY LAKFREAATA KPGPGGGSGA 120 EAKREAAAAA AAAAAAASQQ HQAAQQHMAQ LQGGMPPYGL MPHQFQGLPP GMIPAGFAGL 180 PLPPGMGLLM PGGPVPKQEP K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 9e-62 | NF-YB family protein |