PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH03268.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | NF-YB | ||||||||
Protein Properties | Length: 112aa MW: 12020.8 Da PI: 4.4618 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 52.8 | 9.8e-17 | 5 | 97 | 3 | 88 |
NF-YB 3 eqdrflPianvsrimkkvlPa....nak...iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88 e+d lP a v ri+k l a ++k +skda + e fis+++s a+d cq+++r+t+n+dd+l al+++ f + v plk l+ PNH03268.1 5 ETDVDLPRALVKRIVKAKLTAlagdDGKefgMSKDALTALSESTKVFISLIASTANDICQEKRRQTVNADDVLTALTDMDFPELVGPLKEQLE 97 78999***********99876222234455589*******************************************************98875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 112 aa Download sequence |
MEKPETDVDL PRALVKRIVK AKLTALAGDD GKEFGMSKDA LTALSESTKV FISLIASTAN 60 DICQEKRRQT VNADDVLTAL TDMDFPELVG PLKEQLEGAL RPGEGAFAAL CV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 4e-24 | NF-YB family protein |