![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PNG99251.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 124aa MW: 12920.5 Da PI: 4.3719 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37 | 8.6e-12 | 30 | 75 | 5 | 55 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 GV++d ++grW A I + +++slg f t+e Aa+++++++++++g PNG99251.1 30 GVCFDWTTGRWQAGIAVL-----GRSVSLGAFATEESAARQYDKCALRIRG 75 9****************3.....4*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 124 aa Download sequence |
MNLLPAVRPD SSFSIGSSGP QMPGACSAGG VCFDWTTGRW QAGIAVLGRS VSLGAFATEE 60 SAARQYDKCA LRIRGFQAWL NFPLGDYVEE ADGSLVLDLR AEVTLLEAFL CRSDGGAGAG 120 PSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G39250.1 | 2e-13 | AP2 family protein |