![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | POO03736.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 715aa MW: 78327.9 Da PI: 7.1615 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.8 | 4.1e-16 | 345 | 404 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g POO03736.1 345 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 404 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 45.1 | 2.5e-14 | 449 | 498 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g POO03736.1 449 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 498 9***************988532...5************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 715 aa Download sequence |
MKSMNDHNSN NNNINNWLGF SLSPQMKMEL TSSSSSTTTT APSVSNSVPT SFYLSPTHLT 60 SSGLCYGIGT ENAAAFHSPL SVMPLKSDGS LCIMEALSRS QPEVMVPSSS PKLEDFLGGA 120 TMGSHDQYGS QDREAMALSL DSIYYNQNAE SSETNRDHHH QQHQHHHPLD LLQQPFRQQD 180 QPIPYYSGIP CHGIYQTTPL GEDHQESKQI HIPDCTTTTT TTTNSQISQM PEVDHHSGMP 240 CLKNWVVARQ YSGQHSVDQA GNLVDVDTGV GCGSVGGISC GELQSLTLSM SPGSQSSCIT 300 APRQISPTGI ECVAMVETKK RGSGKIGQKQ TVHRKSIDTF GQRTSQYRGV TRHRWTGRYE 360 AHLWDNSCKK EGQTRKGRQV YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPLENYQAEL 420 EEMKKMTRQE YVAHLRRKSS GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS 480 TQEEAAEAYD VAAIKFRGVN AVTNFDITRY DVEKIMASNT LLAGELARRN KDIMEPIITD 540 QTVDYNSSQQ INGCSEASHI ESHNTNNNTT NGPDWKMGLY QSSPCLDQSL DQKNYRNASS 600 FSMALQDLIG IESVNSSPNT TTTAHHQLAA PPGTHFSNPS SLVTSLSSSR EASPDKSSGP 660 TMAFARPPLA SKFISPTSGG VSSWFPSAAA AAQLRPAAAI SMGHLPVFAA WNIDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-143 | AP2 family protein |