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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO02487.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | AP2 | ||||||||
Protein Properties | Length: 447aa MW: 48695.9 Da PI: 7.4189 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.5 | 3.4e-13 | 136 | 182 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 s+y+GV++++++grW+++I+d + k+++lg f+t Aa+ +++ l POO02487.1 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDT-ALAAASKEEFVHIL 182 78*******************......55**********.88887777776655 PP | |||||||
2 | AP2 | 41.7 | 3e-13 | 194 | 244 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + + k+++lg f+++ eAa+a+++a+ k +g POO02487.1 194 SKYRGVTLHK-CGRWEARMGQF----MGkKYIYLGLFDSEVEAARAYDKAAIKCNG 244 89********.7******5554....224**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 447 aa Download sequence |
MLDLNLNVVV SSDSAASDSA DKPLESSGSF NSSSNLTADD DEAAADATYS FGILNHQNDD 60 VDHHRGSFAR TIQFFPVTAS VAQSSSGSRR QWLGLSCLEG NTSTTTAYGG PAEQRIAPLN 120 QNPVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAL AAASKEEFVH 180 ILRRHSTGFS RGSSKYRGVT LHKCGRWEAR MGQFMGKKYI YLGLFDSEVE AARAYDKAAI 240 KCNGREAVTN FEPSSYDGEM MSEADYEVLS SAGTGGNQSL DLNLGIAPLS VSNGRKENVE 300 ANGFYFEQGC SDIPLHMRER IENFASVGPK LPHGTRMAPE HCSIMSGMNS NFFPNNMERA 360 IERGVDVNSL PNWAWQIQGL NGRAAVPPVP LFSTAASSGF PSSTTTSSSS SPAAGSQLHF 420 PNASILHHHF PPSITNTNTL PHFYCRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 4e-78 | AP2 family protein |