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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON92180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | AP2 | ||||||||
Protein Properties | Length: 664aa MW: 74167.9 Da PI: 6.9851 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.1 | 1.7e-11 | 325 | 381 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+ ++ a++k++g PON92180.1 325 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqSRKGRQ-GGYDMEEKAARSYDLAALKYWG 381 78*******************87776664446655.77******************98 PP | |||||||
2 | AP2 | 46 | 1.3e-14 | 426 | 475 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PON92180.1 426 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 475 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 664 aa Download sequence |
MKSITNDENN NNNNSSNNNW LGFSLSPNMK MEVPSSDPHN NHHYHHHHQN QTQQPSSSSA 60 QTSFFHSSPQ LNYGLYYGVE GENGGLYSPL SVMPLKSDGS LCIMEALTRS QPQAMVTTST 120 PKLEDFFGSG TMGSHHYESN DREVMALSLD NSMFFDQNPE HEEPNHHQNL LNQLQQQSSR 180 HRDQAQHIQA QQQYSYYSGL RNHDIADCNL QLPTMADNGI PEMKNWVPRN YSGNHGLEHK 240 MIGCMTENGG ESGSIGGMAY GDLQSLSLSM SPGSQSSCVT GSQQQISPTV TDCVAIDTKK 300 RGPEKVDQKQ IVHRKSLDTF GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQSRKGRQG 360 GYDMEEKAAR SYDLAALKYW GPSTHINFPL ENYQKELEEM KNMTRQEYVA HLRRKSSGFS 420 RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT 480 NFDITRYDVD RIMASNTLLA GELAKRTKEA AVSAIEAANQ NSASSSINGE TIIPKKSNEG 540 ESDWKMALYH SSTQQFDQKP LSMDTYKAES FSVATENLIQ QEVEESGKMG THLSNASSLV 600 TSLSSSREAS PDKSSLPSLY GVPPSVSKFF TNPTNAVNSW IPSTQQRPAL SMPHMPIFAA 660 WTDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-128 | AP2 family protein |