![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON89800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 368aa MW: 41067 Da PI: 8.8998 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39.1 | 1.8e-12 | 60 | 116 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g PON89800.1 60 SIYRGVTRHRWTGRYEAHLWDkNCWNDsQNKKGRQGAYDDEEAAAHAYDLAALKYWG 116 57*******************99998888888888********************98 PP | |||||||
2 | AP2 | 51.2 | 3.2e-16 | 159 | 210 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g PON89800.1 159 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 210 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 368 aa Download sequence |
MAKVSRKSQK NTAPTTNKGG SDDNNNNNNN NNNNNKTAKT KAIKRTRKSV PRDSPPRRSS 60 IYRGVTRHRW TGRYEAHLWD KNCWNDSQNK KGRQGAYDDE EAAAHAYDLA ALKYWGQDTI 120 LNFPLSTYQE ELKEMEGQSK EEYIGSLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV 180 FGNKYLYLGT YATQEEAATA YDMAAIEYRG LNAVTNFDLS RYIKWLRPTN QNSPNNFQPN 240 PNGDLINSTP NDNPQRSDLI SSSVGDSAGV PPRNGGGGAS PSSALGLLLQ SSKFKEMLER 300 TSAAPDCPTT PSDVEPPRRS FPEDIQTYFD GQDSGSYTEG DDILFGDLGN TFTFPISAPI 360 FHCEELDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G16060.1 | 1e-91 | AP2 family protein |