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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON89224.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | AP2 | ||||||||
Protein Properties | Length: 570aa MW: 62969.7 Da PI: 7.024 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.5 | 2.4e-11 | 177 | 233 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g PON89224.1 177 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 233 57*******************5444.2455536655.779999**************98 PP | |||||||
2 | AP2 | 47 | 6.3e-15 | 278 | 327 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PON89224.1 278 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 327 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 570 aa Download sequence |
MGSMNSNNWL SFPLSPTHPS LPSHLHTSQS HQFSLGLVND NMDNPFQNQA DWNLINSHSS 60 SEVPKVADFL GVTKSENQTD LVPFNEVHHQ ANDADYLFPH NSIVQAVQQT VNVAAASTST 120 YDFQENPSNL QALTLSMGSG KGSSTCETRS DNISTNSTTA VEAAPRRTLD TFGQRTSIYR 180 GVTRHRWTGR YEAHLWDNSC RREGQSRKGR QGGYDKEEKA ARAYDLAALK YWGTSTTTNF 240 PISNYEKELE DMKHMTRQEF VASIRRKSSG FSRGASMYRG VTRHHQHGRW QARIGRVAGN 300 KDLYLGTFST EEEAAEAYDI AAIKFRGLNA VTNFDMNRYD VKSILESNTL PIGGGAAKRL 360 KEAQALESSR KREEMIALSS AYQYGSPGST SSGSNNRLQA FSLLQPPQAT SLIDMPHLSL 420 QNDMSHHYAN HHHHHDHHHD HQDPSLIHQN YIQTQLQLHQ HQANHHHHHQ FYANGYNNSN 480 SIQNHPAFLQ GLMENIGTTS SVVDNSGNSG GSYSGGYGLG MASSSAAGNA EAELALVKVD 540 YDMPSGNYGA WSASGSGNGS NPGGFTMWND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 0.0 | AP2 family protein |