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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON88912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | AP2 | ||||||||
Protein Properties | Length: 588aa MW: 64695.8 Da PI: 6.7208 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.4 | 6.1e-12 | 255 | 311 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e+Aa+a++ a++k++g PON88912.1 255 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 311 78*******************433.44555535555.779999**************98 PP | |||||||
2 | AP2 | 46.4 | 9.8e-15 | 356 | 405 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PON88912.1 356 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 405 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 588 aa Download sequence |
MSNWLGFSLT PHLRIHEGFQ AGREEDQDVH GGGGFPHPHP HHHHHHPISV MPLRSDGSLC 60 VPAQDWRYEN PNEEEGPKLE DFLGCCYSSS HHQAPDETKV YFHNQDHEQN PETISEINVN 120 LAPSFNPNST NGVELEIESS SARENHHPTN PSSLIQSYGH YNSDSSGMYK SWTLGQTLPY 180 NDVSDKSSSS EANGAGCGFQ TLSLTMSPSS QNGVGAISSL QVAAADGGRK RSGGKSLVKE 240 PVPRKSLDTF GQRTSQYRGV TRHRWTGRYE AHLWDNSCRK EGQTRKGRQG GYDKEEKAAR 300 AYDLAALKYW GPTTHINFPL SSYEKELEEM KDMTRQEFVA NLRRKSSGFS RGASMYRGVT 360 RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGTSAVT NFDISRYDVK 420 RICSSSTLIA GDLAKRSSPK DHSPAVASLE VDFNTCPSSP SPQPLLAITS GEPSNELVDM 480 VWSTTSANAD EHHPPQEIDS ETNNNMMFVG SNGRNSLNPQ SPKCSYGSSG EFGGGSGGGE 540 YAHAYFMHGS SISGKYDQHG NNGGNEHSRV GNLGLVQPHV PMFALWNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-129 | AP2 family protein |