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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON79559.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | AP2 | ||||||||
Protein Properties | Length: 589aa MW: 63655.4 Da PI: 7.1816 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.4 | 1.3e-11 | 205 | 261 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g PON79559.1 205 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 261 57*******************5444.2455536655.779999**************98 PP | |||||||
2 | AP2 | 47 | 6.4e-15 | 304 | 355 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PON79559.1 304 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 355 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 589 aa Download sequence |
MDSSSSTTTT HPHPHHHQNW LAFSLSNHPS LFQTAAFTSP NNPAITTTTT TPAEDHHDAS 60 STDLAMFTGA GGGAPKLEDF LGGGGGRATA SNVEPPLLCH HNTDNTNDQF ATDQTIVASL 120 SSTAAEIYES DLKTIAASFL RGFNSNISNN NNSNINNGGT ILNIDQHIDV NPSCHVATPP 180 SLVAPVDPTA AAAKKTVDTF GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR EGQSRKGRQG 240 GYDKEEKAAR AYDLAALKYW GPTTTTNFPV SNYEKELEEM KNMNRQEFVA SLRRKSSGFS 300 RGASIYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT 360 NFDMNRYDVK SIANSNLPIG GMSNTKSKTS SDQLADDHRD LISSVASSVV TFAAPAPQPA 420 STLSFAIPIK QDPSSASSTS SSSSTDHSYW SNIFGFQNPT STTTTTTTTT NTTVPIPSLF 480 HNKPNISSVL NPYNMDHYSA TTTSTSVASH ESHGLNNVVG FFGTGTATSV PYHNSYETSN 540 ATSGYGISSW NNGNSDSNVG PTLHTFHQHH HQAHAKPASL FQTPIFGME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-130 | AP2 family protein |