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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON67167.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | AP2 | ||||||||
Protein Properties | Length: 508aa MW: 55941.1 Da PI: 6.8515 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.5e-17 | 171 | 220 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PON67167.1 171 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 220 78*******************......55************************997 PP | |||||||
2 | AP2 | 43.8 | 6.4e-14 | 263 | 313 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g PON67167.1 263 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 313 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 508 aa Download sequence |
MWDLNDCPDQ SRRDDESEGC SSQKTSVDGD DEKGKRVGSV SNSSSSAVVV EDGSDEEYGG 60 ARIKRRGSKI FGFSVNHDDE DCSNMDTDPP PVTRNFFPVD DSEMAVGPTS AGDGGGGGSS 120 GVGVDGFPRA HWVGVRFCQS DSMRPGPGKS SSVEVSQPMK KSRRGPRSRS SQYRGVTFYR 180 RTGRWESHIW DCGKQVYLGG FDTAHAAARA YDRAAIKFRG VEADINFSLE DYEEDLKQMS 240 NLTKEEFVHV LRRQSTGFPR GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEIEA 300 ARAYDKAAIK CNGKDAVTNF DPSIYENELN SPDQSSSSPG NSNAADHNLD LSLGNSNSNK 360 QNNSVLMSTV GNHSQNAGLT EQHSPSMAFE TDWRNPGFRP KVNGSDSLRR DGYLETETMQ 420 LLSRTHLQSH GYGTNHHGQF RRPGDHTHIP NSYPPNQHHH VQFPSSSNGG RNNAHNINGS 480 DHLSPMALQF FPTNSCNCCS IIRIPTAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-117 | AP2 family protein |