![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON64322.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 525aa MW: 57120.2 Da PI: 8.5675 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 6.8e-17 | 191 | 240 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PON64322.1 191 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 240 78*******************......55************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 525 aa Download sequence |
MLDLNVNINI GADSTCEKIE EVAEMVITEV EKLPERSRAQ MEDSGSSGSS VVNGEIEAPS 60 STTPSNGASR DEDSSNNINT SSSPAFVFDI LKKEKDGLAC AGAGKDWNVS APGFVTRSFF 120 PVAGDNGGTH RHEAGSGGSS SSSRPQWLNL SFADSGGGGG GGTGQPPAEL RVLQQKQQMK 180 KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAARA YDRAAIKFRG 240 VDADINFTVS DYEEDMKQMR SLNKEEFVQI LRRQSTGFSR GSSKYRGVTL HKCGRWEARM 300 GQFLGKKAYD KAALKCNGRE AVTNFEHRTY QGEIILDSNI QGSDHNLDLN LGISPPSDGP 360 KGNDYSFGDT RLHWNPREVV NRIRPMIDVQ SSPHVLTPNH NTSATQNIYP GFLPKHEEIR 420 AITDHQHQNR IEGAANSSPG FLNWAWKIHG NGSSTTTSSV TAMPVFSIAA SSGFSSSTTL 480 AAPSATSTIN PHANFVQNLC LNPSLPIGTI KSVTDNFHSS QIRRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28550.2 | 1e-92 | AP2 family protein |