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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON53220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | AP2 | ||||||||
Protein Properties | Length: 510aa MW: 55802.8 Da PI: 6.5905 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.5e-17 | 172 | 221 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PON53220.1 172 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 221 78*******************......55************************997 PP | |||||||
2 | AP2 | 41.1 | 4.5e-13 | 264 | 314 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g PON53220.1 264 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 314 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 510 aa Download sequence |
MLDLNLNVHS ADSSAQNEDS SSMLLEKIPQ GSGTQMDESG TSNSSIVNAD ASSNGGDDES 60 CSARAGGNEV YTFNFDILKV GGTENDVAVV TKELFPMGGG NGDFKDWQVQ SSSSSSSSRK 120 NWIELGFDQS GAGEVRMIQQ QPQPQPQPQL QPQPQQQQPA KKSRRGPRSR SSQYRGVTFY 180 RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GVDADINFNL SDYEDDLKQM 240 KNLTKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE 300 AARAYDKAAI KCNGREAVTN FEPSTYEGDM NSEASNEGEN HNLDLNLGIS TPSFGNGQKE 360 SEGRIQFHPG PYEMHSRKLL GMENHTSATL SDPPFKGLVM TPEQPLVLNG VYPSFFPSEE 420 RATEKRIALG SSQGLPPWQM HGQVTATPVP LFSTAASSGF SFSAAPPSAA ILPSKPLNPA 480 TLNLCFTSSA AAATHSSQYY YQLKPPQAPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-132 | AP2 family protein |