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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY43324.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | WOX | ||||||||
Protein Properties | Length: 156aa MW: 17898.2 Da PI: 9.4187 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.9 | 2.2e-20 | 23 | 84 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t eq+++L elF++ r+p+++++++++++l +++ ++V++WFqN++a++++ TEY43324.1 23 KCGRWNPTGEQVKVLTELFKSgLRTPTTDQIQKISAELsfygKIESKNVFYWFQNHKARDRQ 84 568*****************99*************************************996 PP | |||||||
2 | Wus_type_Homeobox | 113.8 | 8.7e-37 | 23 | 86 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt eQ+k+L+el+ksGlrtP++++iq+i+aeL+ yGkie+kNVfyWFQN+kaR+rqk+ TEY43324.1 23 KCGRWNPTGEQVKVLTELFKSGLRTPTTDQIQKISAELSFYGKIESKNVFYWFQNHKARDRQKR 86 578***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MDEYSTGFCI RTAAARGGGT GSKCGRWNPT GEQVKVLTEL FKSGLRTPTT DQIQKISAEL 60 SFYGKIESKN VFYWFQNHKA RDRQKRRRIS VDDLPTTPTP SKQFGSAEKN EAERVIETLQ 120 LFPVKSRLYA DDWKENSYNH AMEMDHPTLD LRLSFV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 88 | DRQKRRR |
2 | 85 | 89 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11260.1 | 4e-51 | WOX family protein |