PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY28181.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 389aa MW: 42728.1 Da PI: 8.1417

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY28181.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.5	2.4e-11	117	161	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++l Aa+a+++a+ k++g TEY28181.1 117 SQYRGVTFYRRTGRWESHIWD------CgKQVYLA-----HAAARAYDRAAIKFRG 161 78*****************......5598.....***********997 PP
2	AP2	43.4	8.4e-14	204	254	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g TEY28181.1 204 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 254 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MWDLNDSPDQ RRGGDESEGC SEEKGKRVGS VSNSSSSAVV EEGEEGGGGR CSSLVTRQFF 60 PGAAEDGGPH GFPRAHWVGV KLCQSEPQGS NGGGVALGKS VAQPMKKSRR GPRSRSSQYR 120 GVTFYRRTGR WESHIWDCGK QVYLAHAAAR AYDRAAIKFR GVEADINFTL EDYEDDLKQM 180 SNLTKEEFVH VLRRQSSGFP RGSSKYRGVT LHKCGRWEAR MGQFLGKKYV YLGLFDTEVE 240 AARAYDKAAI KCNGKEAVTN FDPTIYDDEL KSAESSNNAS DHNLDLSLGN SASPQTNATG 300 TLQLHLHSPE SFAISNEAPR YQMFSRPYEY LEGGTNEGGG RAVGVSRNGQ QWQMNEAQMF 360 ANAAASSGFP SAHQNWIHKN GIHPLIRPS

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MWDLNDSPDQ RRGGDESEGC SEEKGKRVGS VSNSSSSAVV EEGEEGGGGR CSSLVTRQFF  60
PGAAEDGGPH GFPRAHWVGV KLCQSEPQGS NGGGVALGKS VAQPMKKSRR GPRSRSSQYR  120
GVTFYRRTGR WESHIWDCGK QVYLAHAAAR AYDRAAIKFR GVEADINFTL EDYEDDLKQM  180
SNLTKEEFVH VLRRQSSGFP RGSSKYRGVT LHKCGRWEAR MGQFLGKKYV YLGLFDTEVE  240
AARAYDKAAI KCNGKEAVTN FDPTIYDDEL KSAESSNNAS DHNLDLSLGN SASPQTNATG  300
TLQLHLHSPE SFAISNEAPR YQMFSRPYEY LEGGTNEGGG RAVGVSRNGQ QWQMNEAQMF  360
ANAAASSGFP SAHQNWIHKN GIHPLIRPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-126	AP2 family protein