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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY19035.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | WOX | ||||||||
Protein Properties | Length: 116aa MW: 13021.7 Da PI: 4.9171 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 30.4 | 6.4e-10 | 22 | 60 | 1 | 38 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCT CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkklg 38 ++ R+++t eq+++L elF++ r+p+++++++++++l+ TEY19035.1 22 KCGRWNPTGEQVKVLTELFKSgLRTPTTDQIQKISAELS 60 568*****************99**************996 PP | |||||||
2 | Wus_type_Homeobox | 54.1 | 3.8e-18 | 22 | 62 | 2 | 42 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeey 42 ++ RW+Pt eQ+k+L+el+ksGlrtP++++iq+i+aeL+ y TEY19035.1 22 KCGRWNPTGEQVKVLTELFKSGLRTPTTDQIQKISAELSFY 62 578***********************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence |
MDEYSTGFCI RAAARGGGTG SKCGRWNPTG EQVKVLTELF KSGLRTPTTD QIQKISAELS 60 FYEFGSAEKN EAERVIETLQ LFPVKSRLYA DDCKENTYNL AMEMDHPTLD LRLSFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11260.1 | 2e-28 | WOX family protein |