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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G15626 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | AP2 | ||||||||
Protein Properties | Length: 369aa MW: 40353.5 Da PI: 6.1868 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.5 | 1.6e-18 | 18 | 67 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +k +g+Wv+eIr+p g ++r++lg+f+tae+Aa+a++ a++ ++g Ro05_G15626 18 AYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFDTAEMAAAAYDVAALHFRG 67 69****999.**********8...325***********************9998 PP | |||||||
2 | AP2 | 57.9 | 2.5e-18 | 199 | 248 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+Wv+eIr+p gk++r++lg++ ++e+Aa+a++ a++ l+g Ro05_G15626 199 KYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYESPEMAAAAYDVAALHLRG 248 8*****999.**********8...557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MGEPNSSSRT VYGAATSAYR GVRKRKWGKW VSEIREPGTK TRIWLGSFDT AEMAAAAYDV 60 AALHFRGREA RLNFPELVNC LPRPASSSSD DIRMAAHEAA LRLGSSGGGT TDSVVAAGHC 120 EVGSSSSSGV APVTVRLSPS QIQAINESPL DSPKMWMQMA EALMLEESMM FSNDFDDKGM 180 NKINQTLKDM EQVHEPAAKY RGVRKRKWGK WVSEIREPGK KTRIWLGSYE SPEMAAAAYD 240 VAALHLRGRA VLLNFPEMVD SLPRPASSSP SDVQLAAQEA ALRFRRLPMG SVSTEAAGGS 300 SGGAVPVTVG LSPSQIQAIN ESPLDSPKMW MPYMYMSHRD EDLFLGEDVS SSMFFYDGDD 360 MQHQSIWDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 4e-46 | ERF family protein |