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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G02132 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | AP2 | ||||||||
Protein Properties | Length: 469aa MW: 51321 Da PI: 7.094 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.8e-17 | 156 | 205 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Ro03_G02132 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 205 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 469 aa Download sequence |
MLDLNLNVLG SAQEDVGSFH GMFPEGSGSA TQMDESGTSN SSVVNADASS TNDDSCSARA 60 AVTTFNFDIL KVGGEDDVVV TKELFPVIGG LNNWPEQGQQ YSPSSSARQN LIELGFDHGG 120 PAEVRLVKQK LQQQAPPPPP QQQVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ 180 VYLGGFDTAH AAARAYDRAA IKFRGVDADI NYNLSDYEED LKQMKNLTKE EFVHILRRQS 240 TGFSRGSSRY RGVTLHKCGR WEARMGQFLG KKAYDKAAIK CNGREAVTNF EASTYEGEMI 300 SDTGNEDGNH NLDLNLGISP PSFANGQKQG EGCLQFHSGP YDGQNGKNMR MEHNENSTMS 360 DPPFKGLIMT SEHPPLWNGV YPSFFPTQER AIETRIALGS QGPPPSWAWQ MHGQVSATPM 420 PLFSTAASSG FSFTATTPPA AVLPLNRSNP PALNLCFTSS ATATPRTSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.1 | 1e-108 | AP2 family protein |