PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr7g0236661 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 141aa MW: 15948 Da PI: 8.0362 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 53.9 | 5.8e-17 | 57 | 127 | 2 | 74 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdg 74 fY +YA+ +GF vr+ +sk+s+ ++e+++++f C+++g++ e + +e+r r + r +Cka++ v ++k+g RcHm_v2.0_Chr7g0236661 57 FYTKYASAAGFVVRIGSSKRSRATNEFIRKEFFCNRQGNSPIELTG--DEKRIRGVVREDCKARMIVVRDKSG 127 9**************************************9998877..99999************99988755 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
METNGIIVPA EMETEPIQAI PLSEENCSTS AFYPQVRNEL KPFNGQQFKT WEEAHVFYTK 60 YASAAGFVVR IGSSKRSRAT NEFIRKEFFC NRQGNSPIEL TGDEKRIRGV VREDCKARMI 120 VVRDKSGGFV TPLAEVQSST Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G15090.1 | 3e-15 | FAR1 family protein |