PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr7g0220421 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | E2F/DP | ||||||||
Protein Properties | Length: 87aa MW: 9707.57 Da PI: 9.0646 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 43.4 | 5.6e-14 | 24 | 77 | 15 | 62 |
E2F_TDP 15 klleksee.givtlnevakeLvse.....dvknkrRRiYDilNVLealnliekk 62 +ll ks+ + ++l+e+a+ L+ + ++ k+RRiYDi+NV +++nliek RcHm_v2.0_Chr7g0220421 24 QLLGKSRVvESISLDEAARLLLGDahnasVMRSKVRRIYDIANVSSSMNLIEKV 77 56667777799*****************99999********************4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 87 aa Download sequence |
MADWGPVVIM VVLFILLSPG LLFQLLGKSR VVESISLDEA ARLLLGDAHN ASVMRSKVRR 60 IYDIANVSSS MNLIEKVKLV EHVIEKY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.1 | 1e-19 | E2F/DP family protein |