PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr7g0206311

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 804aa MW: 91189.9 Da PI: 6.8064

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr7g0206311	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.3	2e-07	47	130	8	88
FAR1 8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 ++ GF++++ +s k n+ + t+ C ++gk +++ k +++ r++ ++++gC klk +k + ++ we++ +e HnH+ RcHm_v2.0_Chr7g0206311 47 RSNGFNIVTLNSDVGKGNR-RATITLGCERSGKYGRRTPKkgkKKNCGRPQGKKKCGCPFKLKGRKLEtNDDWELKVVEGIHNHA 130 6789999999988886666.78899**9998776665522134444577788888888888777668*************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MEVDKAAGIG CSDVGSTFAL DHTSQFTTTE IFKSRKDLIE WVSRVGRSNG FNIVTLNSDV 60 GKGNRRATIT LGCERSGKYG RRTPKKGKKK NCGRPQGKKK CGCPFKLKGR KLETNDDWEL 120 KVVEGIHNHA AWYSKADISV SSRLPSEDKL RGRDVFKDDI SESGSEMQSL MIKLSKYNYI 180 EQHRSCPQTK TILDFFLTHL SSFKLLRAFA RVLEVECISK QEGNHDGAIL MIFGRTSTDI 240 PFFVGIVFLS SNQKESYVWA LRTLQGLMVT SGNTMPDIIV LITTEVALME AVEVVFSRTK 300 LLLCAWAFPS FVEFAYEEVF DLKEELDYFL KRLDVLISSP TAANFELQLL QLHNDFSRYP 360 AVLEYVTHTW LNPHKEKLVA AWTNVFMHFG VANSLRENTK LQEILGNLIE NLTVPVKNQI 420 LKLEESFEEI HAGLELQETK INASLESCLT VNADELRLPE FKELCGAISV TALHLVLQQM 480 MLVNIVDGDL CHCAIRNTHG LPCAHELAKY KKGDRPIPLD CIDPYWMKLD TKPLGKNVEC 540 GVEESMKLHK LFMEMDTSDP SSPPLPKIGG SAQCNTPTVH FKEERQSEVY HMPLKYVGTC 600 PAVLTPYIVD IKDVAADGHC GFRAIASLLG NTDEDGWMTV RRDLMEELEL KSAQYAQLYR 660 LESLGKRVIE LSKSLDCFDR VCYDTNHWMT MPEMGHIIAT RYNVVLMHLS SVQSLTFLPL 720 RTLPSSFSSL REISVGFVNG HFVQVHLKPG HPMPPIARDW ERYHEHERTF PEEWSTLYSA 780 RLDHFKALQP EAYSKVDKEV IKID

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MEVDKAAGIG CSDVGSTFAL DHTSQFTTTE IFKSRKDLIE WVSRVGRSNG FNIVTLNSDV  60
GKGNRRATIT LGCERSGKYG RRTPKKGKKK NCGRPQGKKK CGCPFKLKGR KLETNDDWEL  120
KVVEGIHNHA AWYSKADISV SSRLPSEDKL RGRDVFKDDI SESGSEMQSL MIKLSKYNYI  180
EQHRSCPQTK TILDFFLTHL SSFKLLRAFA RVLEVECISK QEGNHDGAIL MIFGRTSTDI  240
PFFVGIVFLS SNQKESYVWA LRTLQGLMVT SGNTMPDIIV LITTEVALME AVEVVFSRTK  300
LLLCAWAFPS FVEFAYEEVF DLKEELDYFL KRLDVLISSP TAANFELQLL QLHNDFSRYP  360
AVLEYVTHTW LNPHKEKLVA AWTNVFMHFG VANSLRENTK LQEILGNLIE NLTVPVKNQI  420
LKLEESFEEI HAGLELQETK INASLESCLT VNADELRLPE FKELCGAISV TALHLVLQQM  480
MLVNIVDGDL CHCAIRNTHG LPCAHELAKY KKGDRPIPLD CIDPYWMKLD TKPLGKNVEC  540
GVEESMKLHK LFMEMDTSDP SSPPLPKIGG SAQCNTPTVH FKEERQSEVY HMPLKYVGTC  600
PAVLTPYIVD IKDVAADGHC GFRAIASLLG NTDEDGWMTV RRDLMEELEL KSAQYAQLYR  660
LESLGKRVIE LSKSLDCFDR VCYDTNHWMT MPEMGHIIAT RYNVVLMHLS SVQSLTFLPL  720
RTLPSSFSSL REISVGFVNG HFVQVHLKPG HPMPPIARDW ERYHEHERTF PEEWSTLYSA  780
RLDHFKALQP EAYSKVDKEV IKID