PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr7g0204081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 325aa MW: 35136.8 Da PI: 6.6994 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.4 | 2.8e-12 | 96 | 140 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ Iar Rt+ q+ s+ qky RcHm_v2.0_Chr7g0204081 96 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKY 140 8*****************************89************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGGIRKSAS MGNLTHYAGS GSGLLHNNPD 60 SPGEAADHSG AADGYASEDF VPGSSSSCRE RKKGTPWTEE EHRMFLLGLQ KLGKGDWRGI 120 ARNYVISRTP TQVASHAQKY FIRQSNVSRR KRRSSLFDIV ADDSVDTPME PLDFLPENHV 180 EDDTESNHPL PAPPALDEEC ESMASTNSDG EPSPPKADNS QSCYPVMYPT YFSPFPFPFP 240 MWPGYSTEPT KVDTHEVLKP TAVHSKSPIN VDELVGMSNL SIGEPKGQAG PSSLSLNLVE 300 GSSRQSAFHA NPSSGSSNMK SGGSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 1e-123 | MYB_related family protein |