PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr7g0193511

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 339aa MW: 37471.5 Da PI: 6.8529

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr7g0193511	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.1	5.3e-40	53	113	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+ RcHm_v2.0_Chr7g0193511 53 HDQSLKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA 113 68999*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MGHNSLQVCM DSSDWLQGSI HEDQSPMDSS SPLSGDILTC SRPLIERRLR PPHDQSLKCP 60 RCDSTHTKFC YYNNYSLSQP RYFCKTCRRY WTKGGTLRNI PVGGGCRKNK KVASKKPNED 120 HSPSMNPNHL GSSSSSSQHN PTDLQLSFPD QMQFSHLNNL MLGAQGTGNP NFMDGRYGNI 180 NSMLENSNQL RPIDFMESKL EAIVGNARNY DFMGSGGDGL GMVGGLSNMG AHGLESGFHG 240 FCSSSFGSMS LDHHGNNNGT NFMDTCQRLM LPYEANEDHH HHQNEIHDVK PNTKLLSLEW 300 QDQGCSDAGK ESSYGYLNGL GTWTGVMNNY GPSTTNSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	4e-61	Dof family protein