PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr7g0183751

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 317aa MW: 34330.7 Da PI: 8.3709

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr7g0183751	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.9	1e-38	29	88	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+s RcHm_v2.0_Chr7g0183751 29 NHQALKCPRCDSINTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRS 88 57899****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MQDIQSIGGR FFGGAGGGDR RLRPHHNQNH QALKCPRCDS INTKFCYYNN YNLSQPRHFC 60 KSCRRYWTKG GVLRNVPVGG GCRKTKRSKP KSSSSSSPAS PPQQPNSERR ASSNSSSESS 120 SLTNTATATA TEAVSAPSST SSASNLLNIP RPESKFFVSP STNFEAAGAT MLEQSATEIG 180 MFSDIGSFTS LITASSNDVP FGFTNINDIS VSPFRPNQPP AGHLNQVQQN QWEQQHNQNN 240 QELKMPEITG GMLDQTAQVN LSVFQTKING GGGGGFGSLD WQPAGDQGLF DLPNTVDQAY 300 WSQGQWSDQD PPSLYLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	4e-36	Dof family protein