PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr7g0181561

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 467aa MW: 51227.5 Da PI: 7.0112

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr7g0181561	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.3	9.4e-40	121	181	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s RcHm_v2.0_Chr7g0181561 121 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSA 181 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MLQETKDPAI KLFGMKIPLP AAGDYDDLGF TMPGKKRVDQ EHEEEEEEEE KDSPSTKDTE 60 SIEEQDDSPK TEDSTSMEML PDCNVNPKTP SIDEESAKSK APKEKEQNDA TNLQEKTLKK 120 PDKILPCPRC NSMDTKFCYY NNYNVNQPRH FCKACQRYWT AGGTMRNVPV GAGRRKNKNS 180 ASHYRQITIS EALQVAQMDA PNGAQHPGLK SNGRVLNFGV DALVCDSMAS VLHLADKKGL 240 NGTTRNGFHK SEELVFPAPC KGRESGDDCS IASSVTASKP QIQNANGFSA QIPCLPGVPW 300 PYQWNSAVPP PAFGPPGMPI PVFPAAYWNC GVPFQVPVPW FSPQAASPNQ KSPNSASSSP 360 TLGKHSREGE MFRPEVHLEK EEPSKKKNGF VLVPKTLRID DPSEAAKSSI WTTLGIKNDC 420 ISSGNGLFKA FQSQSKGDQK KHVPETSPAL LANPAALSRS LNFHERT

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MLQETKDPAI KLFGMKIPLP AAGDYDDLGF TMPGKKRVDQ EHEEEEEEEE KDSPSTKDTE  60
SIEEQDDSPK TEDSTSMEML PDCNVNPKTP SIDEESAKSK APKEKEQNDA TNLQEKTLKK  120
PDKILPCPRC NSMDTKFCYY NNYNVNQPRH FCKACQRYWT AGGTMRNVPV GAGRRKNKNS  180
ASHYRQITIS EALQVAQMDA PNGAQHPGLK SNGRVLNFGV DALVCDSMAS VLHLADKKGL  240
NGTTRNGFHK SEELVFPAPC KGRESGDDCS IASSVTASKP QIQNANGFSA QIPCLPGVPW  300
PYQWNSAVPP PAFGPPGMPI PVFPAAYWNC GVPFQVPVPW FSPQAASPNQ KSPNSASSSP  360
TLGKHSREGE MFRPEVHLEK EEPSKKKNGF VLVPKTLRID DPSEAAKSSI WTTLGIKNDC  420
ISSGNGLFKA FQSQSKGDQK KHVPETSPAL LANPAALSRS LNFHERT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-104	Dof family protein