PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr6g0311421 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 156aa MW: 17862.4 Da PI: 4.8894 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.8 | 8.2e-32 | 96 | 154 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YY+C+ +gCpvkk+ver++edp +v++tYeg+Hnh+ RcHm_v2.0_Chr6g0311421 96 LDDGFKWRKYGKKMVKNSPNPRNYYKCSCEGCPVKKRVERDKEDPAFVITTYEGTHNHR 154 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MSNNNFNRSV QTPENDFSDQ PNFDEYLMFD DWLEEDHNYV ASGSAQNSVN QVNDDDSGGS 60 SSQLGGSTTN ENGSVLERQQ VKERVAFKMK SEVEILDDGF KWRKYGKKMV KNSPNPRNYY 120 KCSCEGCPVK KRVERDKEDP AFVITTYEGT HNHRTV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 6e-45 | WRKY family protein |