PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr6g0301111 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 102aa MW: 11584.8 Da PI: 9.4867 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.2 | 1.8e-08 | 5 | 51 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 g+WT + + +a + + ++ +W+ ar +g g+t++++k ++ RcHm_v2.0_Chr6g0301111 5 GSWTSRQNKMFENALAVYDKDtpdRWHNLARAVG-GKTAEEVKRHYER 51 89********************************.**********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
MASSGSWTSR QNKMFENALA VYDKDTPDRW HNLARAVGGK TAEEVKRHYE RLVEDVNRIE 60 SGEVPLPNYT RSSKSGSTGS NRSAYTNSMD IEDQRFKSLK LQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 1e-35 | MYB_related family protein |