PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr6g0300001

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 279aa MW: 29458.7 Da PI: 7.0022

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr6g0300001	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.7	2.2e-37	33	89	4	60
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + l+cprC+st+tkfCyynny+l+qPr+fCk+CrryWt+GGalrnvPvGgg+r++k RcHm_v2.0_Chr6g0300001 33 DPLPCPRCNSTQTKFCYYNNYNLAQPRHFCKGCRRYWTRGGALRNVPVGGGTRNKKP 89 5689*************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MPASTTPPEV SGIKRPRLIQ SMPAAYPPPS SADPLPCPRC NSTQTKFCYY NNYNLAQPRH 60 FCKGCRRYWT RGGALRNVPV GGGTRNKKPR LPHRASSSNS SGSPSSSSLT HETTAPNKPT 120 SDSAVEKPDL SSDQQQQQLL NLNDNVTSEG GFSFLTMMNA QEQPGFLSLG GYGYGSGFAH 180 GFQQGYGYGA RAAGVDFPTE MVGAFAGVYG VPGAAASSGF DVNTWQMAVA DHEGQGGGLV 240 DWPEVQILDS VPAVSGGGVK EEKVAADTPT DPCLNFPAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	3e-27	Dof family protein