PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr6g0282571 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 190aa MW: 21700.7 Da PI: 9.4189 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 81.5 | 1.4e-25 | 26 | 113 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 kfY eYA++vGF vr+ + ++ +g++ r++ C+k+g++ ++k + +e+++r++ r gC+a++ vk +k+gkw+vt+++++HnH RcHm_v2.0_Chr6g0282571 26 KFYTEYARRVGFFVRVMQRRRG-IDGRTLARRLGCNKQGFSPNHKGNLGREKKPRVSAREGCNATILVKVDKSGKWVVTRFVKDHNH 111 6****************98887.9999************************************************************ PP FAR1 88 el 89 +l RcHm_v2.0_Chr6g0282571 112 PL 113 99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MGDSEGGSVI EPYVGMEFES EEDAKKFYTE YARRVGFFVR VMQRRRGIDG RTLARRLGCN 60 KQGFSPNHKG NLGREKKPRV SAREGCNATI LVKVDKSGKW VVTRFVKDHN HPLIVTANEF 120 STAGDKDKKI EELMMELDHQ DQLCAAYREK LLSFINNVEA ETEELSAKIK AIVDNVRKVE 180 SETQKHSHRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.1 | 4e-74 | FAR1 family protein |