PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr6g0282551 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 201aa MW: 23364.8 Da PI: 10.2338 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 94.2 | 1.6e-29 | 36 | 123 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+++ k+ +++r++ra tr gCka+++vk+ek+gkw vt++ ++HnH+ RcHm_v2.0_Chr6g0282551 36 FYDAYATQLGFIMRVDAFRRSLRDGKVVWRRLVCNKEGFRKTRPKR-SENRKPRAITREGCKAMIVVKREKSGKWIVTRFIKDHNHS 121 9*******************************************99.9**************************************9 PP FAR1 89 la 90 l+ RcHm_v2.0_Chr6g0282551 122 LV 123 96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MIESSNGKEA ATFEGSSDME PYVGMEFETE EAAKVFYDAY ATQLGFIMRV DAFRRSLRDG 60 KVVWRRLVCN KEGFRKTRPK RSENRKPRAI TREGCKAMIV VKREKSGKWI VTRFIKDHNH 120 SLVVTPANGR RTVILSQTPD EKDMKIRELT AELQRERKRS AAYQEQLDMV LREMEEHSNH 180 LSRNIADIVQ SVKEIESKRI A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 4e-95 | FAR1 family protein |