PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr6g0250991 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 143aa MW: 16300.2 Da PI: 9.4439 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 44.5 | 2.6e-14 | 27 | 89 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r++R+t+t++ +++L+elF++ r p+ e+ +++ +l +++ ++V++WF N+R +ek+ RcHm_v2.0_Chr6g0250991 27 RQSRWTPTTDHIRILNELFYNkgVRSPTIEQVQRICLQLkwygKIEFKNVYYWFVNQRSQEKQ 89 689*****************7789*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 83.3 | 2.9e-27 | 28 | 91 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RWtPt++ i+iL+el++ +G+r+P+ e++qri +L+ yGkie kNV+yWF N+++ e+qk+ RcHm_v2.0_Chr6g0250991 28 QSRWTPTTDHIRILNELFYnKGVRSPTIEQVQRICLQLKWYGKIEFKNVYYWFVNQRSQEKQKK 91 79**************98769*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MEPQTQQPTE DGGSNKAAGS SANMLCRQSR WTPTTDHIRI LNELFYNKGV RSPTIEQVQR 60 ICLQLKWYGK IEFKNVYYWF VNQRSQEKQK KRSTSDVHVP MQRSGLVDDD KVTNWKHEDQ 120 YINFGSSAPA SASSAGVLIA FNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 4e-25 | WOX family protein |