PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr5g0025851 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | bHLH | ||||||||
Protein Properties | Length: 97aa MW: 11483.3 Da PI: 11.2371 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.3 | 4.7e-07 | 8 | 30 | 33 | 55 |
.TTS-STCHHHHHHHHHHHHHHH CS HLH 33 apskKlsKaeiLekAveYIksLq 55 ++s K +Ka++L +AveY+k+Lq RcHm_v2.0_Chr5g0025851 8 PNSNKTDKASMLDEAVEYLKQLQ 30 36789*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence |
MLIWCLIPNS NKTDKASMLD EAVEYLKQLQ LQVQREERKK QKKGEKGRNR RRGRREGQKR 60 QGNPKDEKNC STSQIQGIQR KRKLHISLFM IRSGYLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67110.1 | 4e-13 | bHLH family protein |