PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr5g0007751

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 295aa MW: 32750.2 Da PI: 8.0622

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr5g0007751	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	113.5	9.4e-36	43	103	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprC+stntkfCyynny+ +qPr+fC+aC+r+Wt+GG+lrnvPvGg rknk+++ RcHm_v2.0_Chr5g0007751 43 QSEQLKCPRCESTNTKFCYYNNYNKTQPRHFCRACKRHWTNGGTLRNVPVGGHGRKNKRTR 103 57899*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MGLSTKQVSS DGLDWSQTLL QAQSFELPKP PVARRQQQQS QEQSEQLKCP RCESTNTKFC 60 YYNNYNKTQP RHFCRACKRH WTNGGTLRNV PVGGHGRKNK RTRKPNSSAS AAKTTTNGAC 120 TIATTTRVNN TNLVFDRTDG VQRLNSHLAI DGEQRLNSHT GVLLPQQNLI TSSELDNHIF 180 SSSSGLSSTT MPFNFLQAGR AQVLSFPFSS SSTSSSFDAI STSFQSPNVC NYPQEFKSME 240 EPTITSIMPS TTITIPQANN SSVGMYTSND WNWEDIETLV STDLNVPWDD SDMNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	3e-30	Dof family protein