PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr4g0424371 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 173aa MW: 19352.6 Da PI: 6.7988 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 51 | 2.5e-16 | 7 | 67 | 2 | 56 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 ++R+ +t +q+++L+el+ + p+ e+ ++++ +l +++ ++V++WFqN+Ra+ek RcHm_v2.0_Chr4g0424371 7 STRWLPTIDQIRILKELYDDkgVKSPTVEQVQRITLQLkwyeQIENKNVFYWFQNQRAQEK 67 58*****************6579************************************98 PP | |||||||
2 | Wus_type_Homeobox | 87.8 | 1.1e-28 | 6 | 70 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW Pt +Qi+iL+ely+ +G+++P+ e++qrit +L+ y +ie+kNVfyWFQN++a e+ k+ RcHm_v2.0_Chr4g0424371 6 SSTRWLPTIDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYEQIENKNVFYWFQNQRAQEKLKK 70 789****************999***************************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MHCRQSSTRW LPTIDQIRIL KELYDDKGVK SPTVEQVQRI TLQLKWYEQI ENKNVFYWFQ 60 NQRAQEKLKK KLTSDVQVPK QRSELVGGSI NLNFGSTSST GVGGSIMEQR GEDHQEIKTL 120 PLFPMHGEDI FGNMKITSEG GSGYDDYSGG GYNGGSRISL ELSLNSSGAT DSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 9e-27 | WOX family protein |