PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr4g0421141 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 109aa MW: 13019.9 Da PI: 10.4599 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 84 | 2.4e-26 | 11 | 100 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHn 86 +fYn+Y + GFs+r++++ k+kr++e t+r fvC keg r++++++ r++raetrtgC a+l +k+++ ++k+ vt++++eHn RcHm_v2.0_Chr4g0421141 11 DFYNRYRGKKGFSIRRETHGKNKRTKELTSRLFVCCKEGIRSKDNRD-YMIRKPRAETRTGCGAQLCIKLNRrNNKFFVTHFVEEHN 96 6******************************************9999.99*********************99************** PP FAR1 87 Hela 90 H+l+ RcHm_v2.0_Chr4g0421141 97 HPLV 100 **96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 109 aa Download sequence |
MEFDSEQAAY DFYNRYRGKK GFSIRRETHG KNKRTKELTS RLFVCCKEGI RSKDNRDYMI 60 RKPRAETRTG CGAQLCIKLN RRNNKFFVTH FVEEHNHPLV GKEYPRSLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 3e-20 | FAR1 family protein |