PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr4g0415831 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 121aa MW: 14758.5 Da PI: 10.785 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.2 | 3.4e-17 | 5 | 52 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++++++G g+W++I+ g++R++k+c+ rw++yl RcHm_v2.0_Chr4g0415831 5 KGAWTKEEDHLLRKCIEKHGEGRWHKIPLQAGLKRCRKSCRMRWLNYL 52 79********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MELRKGAWTK EEDHLLRKCI EKHGEGRWHK IPLQAGLKRC RKSCRMRWLN YLKPTIKRGE 60 FEDDEVDLMI RLYKLLGNRQ GLHTTDRFLY NILIKFRANK VKKKKKKNLF CPFKHEKKNF 120 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 2e-38 | MYB family protein |