PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr4g0406491 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 177aa MW: 20707.9 Da PI: 10.037 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 85.3 | 9.5e-27 | 12 | 100 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fY++YA+++GF +r+ + ++s+r+g+i r++ C+keg+ + + k r++ra+tr gCka+++vk +k+gkw++tk+++eHnH+ RcHm_v2.0_Chr4g0406491 12 FYDDYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRASTREGCKAMIHVKYDKSGKWVITKFVKEHNHS 98 9**************************************99999998***************************************9 PP FAR1 89 la 90 l+ RcHm_v2.0_Chr4g0406491 99 LV 100 96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MEFESEDAAK IFYDDYARRL GFVMRVMSCR RSERDGRILA RRLGCNKEGH CVSIRGKFGP 60 VRKPRASTRE GCKAMIHVKY DKSGKWVITK FVKEHNHSLV VSPREARQTM DEKDKKIQEL 120 SAELRNKKRL CTTYQEQLTA FMKIVEEYND QLSLKVKNVV NNLKEFESID VELTQRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-107 | FAR1 family protein |