PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr3g0485041
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Dof
Protein Properties Length: 363aa    MW: 41738.1 Da    PI: 9.0385
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr3g0485041genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof54.62.3e-17292347458
                  zf-Dof   4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrn.vPvGggrrkn 58 
                             ++l+cprC+s+ntkf       +s Pry Ck+C+  Wt GG +r  + +Gg  r++
  RcHm_v2.0_Chr3g0485041 292 QKLQCPRCESNNTKFSVLKAKRISAPRYHCKNCKMEWTLGGEIRKpIVLGGVNRRD 347
                             789****************************************9746677777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MQMVADSFWS SKTKAKQESC LRLKGADCLF HPFFHQISYL YLHLIQIHYS PMTDFTLIDS  60
ETEIEASRGT SRTRVNMAEG SSIEGPQGKR LLQHLKDLHE ENKTLMKLVA DKEKRIESYM  120
IDFEELNGLK IIVNKLEKQN FVLTQANSQM LQELRSLRNH VQKVEQPTLP PAQEINQVQE  180
AQQPNLQPAQ ARVQVQELEP PSLQAAQASS QMQEEELDLE NSQILLELKS HDHMLSSTDE  240
AVRECIDMIE KLQALGPPTN EAIQQVKAKL QALGPLTIDA VRQIRVGFRK LQKLQCPRCE  300
SNNTKFSVLK AKRISAPRYH CKNCKMEWTL GGEIRKPIVL GGVNRRDLLQ QRIQRVQRRR  360
MKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64620.14e-13Dof family protein